Please enable JavaScript to view this site.

Features and functionality described on this page are available with our new Pro and Enterprise plans. Learn More...

This section provides step-by-step instructions for running Multifactor ANOVA in Prism. The analysis consists of several tabs where you'll make choices about your data and model:

Setting Up the Analysis

Entering data for Multifactor ANOVA

Organizing your Multiple Variables data table

Defining response and grouping variables

Data quality checks

Configuring the Model

Data tab: Variable assignment

Selecting your response (Y) variable

Selecting your grouping variables (factors)

Understanding variable roles

Model tab: Experimental design

Choosing which factors to include

Deciding which interactions to test

Full model vs. main effects only

Performing Multiple Comparisons (Post-hoc tests)

Multiple Comparisons tab

Main effect comparisons

Simple effect comparisons

Cell-by-cell comparisons

Choosing a multiple comparison test

Options and Output

Options tab

Graphing options

Output format choices

Setting defaults

Residuals tab

Checking model assumptions

Diagnostic plots

Identifying outliers

Understanding Results

Interpreting results: Multifactor ANOVA

Reading the ANOVA table

Understanding main effects and interactions

Interpreting multiple comparisons

Reporting your results

© 1995-2019 GraphPad Software, LLC. All rights reserved.