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Table of contents
Intro to regression
Nonlinear regression
Curve fitting with Prism
Interpreting the results
Comparing two curves
Distributions of best-fit values
Radioligand binding
Saturation binding
Competitive binding

Kinetics of binding

Dose-response curves
Enzyme kinetics


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Introduction
Find Vmax & KM
Kinetics vs. binding
Lineweaver- Burk
Allosteric enzymes
Inhibitors
Standard curves
More information
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Comparison of enzyme kinetics with radioligand binding

The Michaelis-Menten equation for enzyme activity has a form similar to the equation describing equilibrium binding.

MathType Equation

Note these differences between binding experiments and enzyme kinetics.

   It usually takes many minutes or hours for a receptor incubation to equilibrate. It is common (and informative) to measure the kinetics prior to equilibrium. Enzyme assays reach steady state (defined as constant rate of product accumulation) typically in a few seconds. It is uncommon to measure the kinetics of the transient phase before that, although you can learn a lot by studying those transient kinetics (see an advanced text of enzyme kinetics for details).
   The equation used to analyze binding data is valid at equilibrium - when the rate of receptor-ligand complex formation equals the rate of dissociation. The equation used to analyze enzyme kinetic data is valid when the rate of product formation is constant, so product accumulates at a constant rate. But the overall system is not at equilibrium in enzyme reactions, as the concentration of product is continually increasing.
   KD is a dissociation constant that measures the strength of binding between receptor and ligand. KM is not a binding constant. Its value includes the affinity of substrate for enzyme, but also the kinetics by which the substrate bound to the enzyme is converted to product
   Bmax is measured as the number of binding sites normalized to amount of tissue, often fmol per milligram, or sites/cell. Vmax is measured as moles of product produced per minute.

Displaying enzyme kinetic data on a Lineweaver- Burk plot


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